Expression data sets with full set of Synechocystis genes


Microarray: All perturbations

Microarray: Environmental perturbations

RNA-Seq: Environmental perturbations


IMPORTANT NOTE:
The displayed heatmaps are composed of individual indexed images for single genes. Internet browser commonly save these images in their cache for faster access for faster presentation when using CyanoEXpress again. However, during database updates, the index of genes in CyanoEXpress might change and thus does not correspond to the images stored in the brower cache anymore. In this case, you may notice that the displayed fold changes (which are the correct ones) do not correspond to the displayed colors. For instance, the heatmap shows green color for an expression level, despite positive log fold changes shown for a gene under a certain condition..
To avoid this, the frames have to be explicitly reloaded or more simple and effective:

PLEASE DELETE THE CONTENT OF THE BROWSER CAGE IF A NEW CYANOEXPRESS VERSION WITH ADDITIONAL DATA HAS BEEN RELEASED.

Instructions how to delete browser cache can be found on relevant web-pages for the different browser. The current CyanoEXpress version is shown on top of the page and the new version are described on the News page

.

Microarray-based expression data sets with process-specific sets of Synechocystis genes


Amino acid biosynthesis

Biosynthesis of cofactors, prosthetic groups, and carriers

Cell envelope

Cellular processes

Central intermediary metabolism

Energy metabolism

Fatty acid, phospholipid and sterol metabolism

Photosynthesis & Respiration

Purines, pyrimidines, nucleosides, and nucleotides

Regulatory functions

DNA replication, restriction, modification, recombination, and repair

Transcription

Translation

Transport and binding proteins

Other categories