| Label |
Type of Perturbation |
Data source |
Platform |
Publication or Contributor |
Further Description |
| WT_growth_stage_1h |
environmental |
GEO: GSE11970 |
Oligo array: GPL7016 |
PMID: 18644144 |
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| WT_growth_stage_2.5h |
| WT_growth_stage_4h |
| WT_growth_stage_7h |
| WT_growth_stage_11h |
| WT_circadian_4h |
environmental |
KEGG: ex0001365/70 & ex0000868/73 |
TaKara CyanoChip |
PMID: 15743968 |
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| WT_circadian_8h |
KEGG: ex0001371/6 & ex0000874/9 |
| WT_circadian_12h |
KEGG: ex0001377/82 & ex0000880/5 |
| WT_circadian_16h |
KEGG: ex0001383/88 & ex0000886/91 |
| WT_circadian_20h |
KEGG: ex0001389/94 & ex0000892/7 |
| WT_circadian_24h |
KEGG: ex0001395/400 & ex0000898/903 |
| WT_circadian_28h |
KEGG: ex0001401/6 & ex0000904/09 |
| WT_circadian_32h |
KEGG: ex0001407/12 & ex0000910/5 |
| WT_circadian_36h |
KEGG: ex0001413/8 & ex0000916/21 |
| WT_circadian_40h |
KEGG: ex0001419/24 & ex0000922/7 |
| WT_circadian_44h |
KEGG: ex0001425/30 & ex0000928/33 |
| WT_circadian_48h |
KEGG: ex0001431/6 & ex0000934/9 |
| WT_blue_red_15min |
environmental |
ArrayExpress: E-TABM-339 |
Synechocystis 11K oligo DNA microarray |
PMID:19759342 |
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| WT_blue_red_1.5h |
| WT_blue_red_2h |
| WT_blue_red_3h |
| WT_blue_red_45min |
| WT_blue_red_6h |
| WT_Dark_30min |
environmental |
GEO: GSE45667 |
GPL15867 |
PMID: 23601192 |
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| WT_Dark_5.5h |
| WT_Dark_11.5h |
| WT_dark |
environmental |
GEO: GSE16162 |
GPL6546 |
PMID: 21245330 |
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| WT_Light_30min |
environmental |
GEO: GSE45667 |
GPL15867 |
PMID: 23601192 |
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| WT_Light_5.5h |
| WT_HL_15min |
environmental |
ArrayExpress: E-TABM-333 |
Synechocystis 11K oligo DNA microarray |
PMID: 18599646 |
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| WT_HL_1h |
| WT_HL_2h |
| WT_HL_3h |
| WT_HL_4h |
| WT_HL_6h |
| WT_HL1_15min |
environmental |
KEGG: ex0000140/3 & ex0000160/1 |
TaKara CyanoChip |
PMID: 11283337 |
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| WT_HL2_1h |
KEGG: ex0000144/7 & ex0000152/3 |
| WT_HL3_6h |
KEGG: ex0000148/9 & ex0000162/3 |
| WT_HL4_15h |
KEGG: ex0000164/5 & ex0000168/9 |
| WTG_HL_30min |
environmental |
GEO: GSE4019 |
GPL3356 |
PMID: 15175303 |
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| WTG_HL_1h |
| WTG_HL_3h |
| WTG_HL_6h |
| WT_HL |
environmental |
GEO: GSE16162 |
GPL6546 |
PMID: 21245330 |
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| WT_glucose_LL |
environmental |
GEO: GSE4019 |
GPL3356 |
PMID: 15175303 |
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| hik33_HL_30min_glucose |
mutant |
| hik33_HL_1h_glucose |
mutant |
| hik33_HL_3h_glucose |
mutant |
| hik33_HL_6h_glucose |
mutant |
| CS_HL_GL |
environmental |
GEO: GSE50060 |
GPL17595 |
PMID:24009334 |
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| SigCDE_HL_GL |
mutant |
| SigCDE_CS_HL |
mutant |
| SigCDE_CS_GL |
mutant |
| SigBCDE_CS |
mutant |
GEO: GSE69981 |
GPL17595 |
PMID:26354085 |
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| WT_DBMIB_20uE_light |
environmental |
KEGG: ex0000834/5 & ex0000838/9 |
TaKara CyanoChip |
PMID: 12591891 |
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| WT_DBMIB_300uE_light |
KEGG: ex0000156/7 & ex0000166/7 |
| WT_DCMU_20uE_light |
KEGG: ex0000158/9 & ex0000832/3 |
| WT_DCMU_300uE_light |
KEGG: ex0000030,38 & ex0000049/50 |
| WT_methyl_viologen_HL |
environmental |
KEGG: ex0001349,54,55 |
TaKara CyanoChip |
PMID: 15047877 |
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| WT_methyl_viologen_NL |
environmental |
KEGG: ex0001441/4 |
| perR_methyl_viologen |
mutant |
KEGG: ex0001341/4 |
| WT_H2O2_15min |
environmental |
GEO: GSE3703 |
Takara CyanoChip v.2.0 |
PMID:17910763 |
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| WT_H2O2_30min |
| WT_H2O2_3h |
| WT_H2O2_5h |
| WT_H2O2_7h |
| PSI_less_vs_PSI_less_ScpABCDE |
mutant |
GEO: GSE59371 |
GPL17595 |
PMID:26646103 |
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| PSI_less_vs_PSI_less_ScpABCD |
| WT_novobiocin |
environmental |
KEGG: ex0001825/6 |
TaKara CyanoChip |
PMID: 19763333 |
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| WT_novobiocin_HS |
KEGG: ex0001831/34 |
| WT_novobiocin_LT |
KEGG: ex0001827/30 |
| WT_novobiocin_salt_stress |
KEGG: ex0001835/38 |
| hik20 |
mutant |
KEGG: ex0001821/4 |
TaKara CyanoChip |
PMID: 22294932 |
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| hik10_sorbitol |
mutant |
KEGG: ex0001651/4 |
TaKara CyanoChip |
PMID: 15471853 |
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| hik16_sorbitol |
mutant |
KEGG: ex0001655/8 |
| hik2_sorbitol |
mutant |
KEGG: ex0001647/50 |
| hik33_sorbitol |
mutant |
KEGG: ex0001659/62 |
| hik34_sorbitol |
mutant |
KEGG: ex0001663/6 |
| hik41_sorbitol |
mutant |
KEGG: ex0001667/70 |
| rre1_sorbitol |
mutant |
KEGG: ex0001671/4 |
| rre17_sorbitol |
mutant |
KEGG: ex0001679/82 |
| rre3_sorbitol |
mutant |
KEGG: ex0001675/8 |
| rre31_sorbitol |
mutant |
KEGG: ex0001683/6 |
| WT_sorbitol |
environmental |
KEGG: ex0001641/6 |
| hik41_sorbitol_2 |
mutant |
KEGG: ex0001705/8 |
TaKara CyanoChip |
PMID: 15805106 |
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| hik10_NaCl |
mutant |
KEGG: ex0001691/94 |
| hik16_NaCl |
mutant |
KEGG: ex0001695/98 |
| hik33_NaCl |
mutant |
KEGG: ex0001699/700 |
| hik34_NaCl |
mutant |
KEGG: ex0001701/4 |
| rre1_NaCl |
mutant |
KEGG: ex0001709/12 |
| rre17_NaCl |
mutant |
KEGG: ex0001713/17 |
| rre3_NaCl |
mutant |
KEGG: ex0001717/20 |
| rre31_NaCl |
mutant |
KEGG: ex0001721/24 |
| WT_NaCl |
environmental |
KEGG: ex0001687/90 |
| WT_NaCl_2 |
environmental |
GEO: GSE37482 |
NimbleGen Synechocystis sp. PCC 6803 |
PMID: 22846903 |
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| WT_22C_20min |
environmental |
KEGG: ex0000002/3_ex0000012/3_14/5 |
TaKara CyanoChip |
PMID: 11298290 |
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| WT_24C_20min |
environmental |
KEGG: ex0001878/9 |
TaKara CyanoChip |
PMID:19926653 |
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| WT_24C_60min |
KEGG: ex0001880/1 |
| WT_24C_180min |
KEGG: ex0001882/3 |
| WT_22C_20min_2 |
environmental |
KEGG: ex0001839/40 |
TaKara CyanoChip |
PMID: 16916897 |
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| spkB_low_temperature |
mutant |
KEGG: ex0001841/2 |
| spkC_low_temperature |
mutant |
KEGG: ex0001843/4 |
| spkD1_low_temperature |
mutant |
KEGG: ex0001845/6 |
| spkD2_low_temperature |
mutant |
KEGG: ex0001847/8 |
| spkE_low_temperature |
mutant |
KEGG: ex0001849/50 |
| spkF_low_temperature |
mutant |
KEGG: ex0001851/52 |
| spkG_low_temperature |
mutant |
KEGG: ex0001853/54 |
| spkH_low_temperature |
mutant |
KEGG: ex0001855/56 |
| spkI_low_temperature |
mutant |
KEGG: ex0001857/58 |
| spkJ_low_temperature |
mutant |
KEGG: ex0001859/60 |
| spkK_low_temperature |
mutant |
KEGG: ex0001861/62 |
| spkL1_low_temperature |
mutant |
KEGG: ex0001863/64 |
| spkL2_low_temperature |
mutant |
KEGG: ex0001865/66 |
| hik33_22C |
mutant |
KEGG: ex0000008/11_ex0000004/5 |
TaKara CyanoChip |
PMID: 11298290 |
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| hik33_vs_WT_22C |
KEGG: ex0000006/7_ex0000016/9 |
| crhR_low_temperature_20min |
mutant |
KEGG: ex0001872/3 |
TaKara CyanoChip |
PMID:19926653 |
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| crhR_low_temperature_60min |
KEGG: ex0001874/5 |
| crhR_low_temperature_180min |
KEGG: ex0001876/7 |
| crhR_vs_complemented_24C |
KEGG: ex0001886/7 |
| crhR_vs_complemented_34C |
KEGG: ex0001888/9 |
| crhR_vs_WT_34C |
KEGG: ex0001884/5 |
| WT_heat_30min |
environmental |
GEO: GSE21133 |
TakaraBio CyanoCHIP ver1.4-ver1.6 |
PMID: 20463904 |
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| WT_heat_1h |
| WT_heat_2h |
| WT_heat_4h |
| WT_heat_8h |
| CS_40C_CS_32C |
environmental |
GEO: GSE59451 |
GPL17595 |
PMID:25386944 |
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| rpoZ_40C_rpoZ_32C |
mutant |
| rpoZ_40C_CS_40C |
mutant |
| rpoZ_32C_CS_32C |
mutant |
GEO: GSE51647 |
GPL17595 |
PMID:24476911 |
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| WT_S_Starvation_1h |
environmental |
GEO: GSE11970 |
GPL7016 |
PMID: 18644144 |
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| WT_S_Starvation_HEPES_1h |
| WT_S_Starvation_3h |
| WT_S_Starvation_6h |
| WT_S_Starvation_12h |
| WT_S_Starvation_HEPES_12h |
| WT_S_Starvation_24h |
| WT_S_Starvation_HEPES_24h |
| WT_S_Starvation_48h |
| WT_S_Starvation_72h |
| WT_CO2_depletion |
environmental |
GEO: GSE16162 |
GPL6546 |
PMID: 21245330 |
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| WT_CO2_limitation_1h |
environmental |
GEO: GSE1695 |
GPL965 |
PMID: 14612435 |
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| WT_CO2_limitation_3h |
| WT_CO2_limitation_3.3h |
| WT_CO2_limitation_6h |
| WT_CO2_limitation_12h |
| WT_high_CO2_24h_vs_low_CO2_3h |
environmental |
GEO: GSE31672 |
GPL6546 |
PMID: 22096149 |
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| WT_high_CO2_vs_low_CO2_24h |
environmental |
| WT_high_CO2_vs_GlcD1/2_high_CO2_24h |
mutant |
| GlcD1/2_high_CO2_24h_vs_low_CO2_3h |
mutant |
| GlcD1/2_high_CO2_vs_low_CO2_24h |
mutant |
| ccmM_high_CO2_vs_low_CO2_24h |
mutant |
| WT_high_CO2_vs_ccmM_high_CO2 |
mutant |
| hik31_lowO2 |
mutant |
GEO: GSE24882 |
GPL11088 |
PMID: 20929957 |
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| WT_lowO2 |
environmental |
| hik31_vs_WT_lowO2 |
mutant |
| hik31 |
mutant |
| WT_Cd_15min |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
PMID:17910763 |
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| WT_Cd_30min |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_1h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_1.25h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_1.5h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_3h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_5h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_6h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| WT_Cd_16h |
environmental |
GEO: GSE3682 |
Takara CyanoChip v.1.2 |
| perR_excess_Cd |
mutant |
GEO: GSE3719 |
Takara CyanoChip v.2.0 |
| WT_Zn_excess_30min |
environmental |
GEO: GSE3716 |
Takara CyanoChip v.2.0 |
| WT_Zn_excess_240min |
environmental |
GEO: GSE3716 |
Takara CyanoChip v.2.0 |
| WT_Fe_low1_96h |
environmental |
GEO: GSE3717 |
Takara CyanoChip v.2.0 |
| WT_Fe_low2_96h |
environmental |
GEO: GSE3717 |
Takara CyanoChip v.2.0 |
| WT_Fe.depleton.3h |
environmental |
GEO: GSE39804 |
GPL15867 |
PMID: 23275872 |
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| WT_Fe.depletion.12h |
| WT_Fe.depletion.24h |
| WT_Fe.depletion.48h |
| WT_Fe.depletion.72h |
| WT_Fe_high_4h |
environmental |
GEO: GSE3715 |
Takara CyanoChip v.2.0 |
PMID:17910763 |
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| WT_Fe_high_6h |
| WT_0h.PsrR1_0h |
mutant |
GEO: GSE41411 |
GPL15867 |
PMID: 25248550 |
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| WT_0h.WT_24h.Cu.depleted |
environmental |
| WT_0h.PsrR1_24h.Cu.depleted |
mutant |
| WT_24h.PsrR1_24h.Cu.depleted |
mutant |
| PsrR1_0h.PsrR1_24h.Cu.depleted |
mutant |
| spkA |
mutant |
KEGG: ex0001637/40 |
TaKara CyanoChip |
PMID: 16916897 |
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| hfq |
mutant |
GEO: GSE10708 |
GPL6546 |
PMID: 18832319 |
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| WT_alkoxide_gel |
environmental |
GEO: GSE37482 |
NimbleGen Synechocystis sp. PCC 6803 |
PMID: 22846903 |
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| WT_aqueous_gel |
| WT_sycrp1 |
mutant |
KEGG: ex0000022/24_&_ex0000044 |
TaKara CyanoChip |
PMID: 12085767 |
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